PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G102700.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB
Protein Properties Length: 280aa    MW: 31741.6 Da    PI: 9.1505
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G102700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.2e-092873346
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                         +WT eE +++ +a +++ ++   +W ++a++++ g+t  +++  ++ 
  Manes.09G102700.2.p 28 KWTHEENKQFENALALYDKDepdRWQKVAAMIP-GKTVGDVIKQYRE 73
                         8********************************.******9999986 PP
2Myb_DNA-binding45.91.3e-14106150347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ +++ + +++G+g+W+ I+r + ++Rt+ q+ s+ qky
  Manes.09G102700.2.p 106 PWTEEEHRQFLIGLEKHGKGDWRNISRDFVTTRTPTQVASHAQKY 150
                          8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.5E-52273IPR009057Homeodomain-like
PROSITE profilePS5129310.8962479IPR017884SANT domain
SMARTSM007177.8E-102577IPR001005SANT/Myb domain
SuperFamilySSF466891.31E-112782IPR009057Homeodomain-like
CDDcd001677.77E-82874No hitNo description
PfamPF002493.5E-82873IPR001005SANT/Myb domain
PROSITE profilePS5129419.78698155IPR017930Myb domain
SuperFamilySSF466891.05E-17101155IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-16102154IPR006447Myb domain, plants
SMARTSM007171.5E-11103153IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.3E-12103149IPR009057Homeodomain-like
PfamPF002494.6E-12106150IPR001005SANT/Myb domain
CDDcd001678.41E-10106151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MNPGSEILSP ASYLANSNWL FQETRGTKWT HEENKQFENA LALYDKDEPD RWQKVAAMIP  60
GKTVGDVIKQ YRELEEDVFD IEYYTPGGKR TAATRSREPG RKKGVPWTEE EHRQFLIGLE  120
KHGKGDWRNI SRDFVTTRTP TQVASHAQKY FIRQSTEGKD KRRSSIHDIT IVNLLPDVKS  180
SSADEKKSSP NHSISSLQSQ PQPKIVGIRK GLADMKLQNE GEDGAGVFSQ ANGNLLMPPF  240
CEISSYGQKL QEHNLLKETL PGYHFPPYNL ISQQPMKRQ*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G102700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621852.10.0transcription factor DIVARICATA-like isoform X2
SwissprotQ8S9H76e-75DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2C9V9I70.0A0A2C9V9I7_MANES; Uncharacterized protein
STRINGcassava4.1_012347m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.17e-95MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]