PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.09G033500.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 418aa MW: 47077.6 Da PI: 8.2903 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.4 | 2.4e-31 | 242 | 296 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fv +v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ Manes.09G033500.2.p 242 KTRIRWTQDLHEKFVMCVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 296 68****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.636 | 239 | 299 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.7E-28 | 240 | 297 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.04E-16 | 240 | 296 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.6E-23 | 242 | 297 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-7 | 246 | 295 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.2E-20 | 327 | 373 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence Send to blast |
MNTSKIDCQE RVQQNNGLNG DFALHFSQCF GNQQSWNMGI RTQQPVMEAG LQQQNHRPND 60 KSSTTIMRSF ESPASAFYAT ERYMGFPQYD CQVGVPPLSF PYSKPFDSQQ SSRENYAIDP 120 GEQAESNLDL RRNLQPIVKP HFSVDHYHKS YKGPCSNSFG NKLHLFERNK LSNNGAASMG 180 HHFSIPFQAD QDHRVGGNPC ASPFSQLGFS SRQEIPSPRF SSPGACISSG NPEAAGAVLS 240 SKTRIRWTQD LHEKFVMCVN RLGGAEKATP KAILKLMDTD GLTIFHVKSH LQKYRIAKYM 300 PDSSEGKSEK RTTINDVPQI DTKTGLQISE ALQLQLDVQR RLHEQLEIQK NLQLRIEEQG 360 RKLQRMFDQQ QRTSNSLLRN QNLDRKSSPD DPAFSFEDIE VSIIEGSSDT QFPSKIS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-22 | 242 | 299 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-22 | 242 | 299 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-22 | 242 | 299 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-22 | 242 | 299 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-22 | 242 | 299 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.09G033500.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021622513.1 | 0.0 | myb family transcription factor PHL5-like | ||||
Refseq | XP_021622514.1 | 0.0 | myb family transcription factor PHL5-like | ||||
TrEMBL | A0A2C9V7L2 | 0.0 | A0A2C9V7L2_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_008485m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 7e-82 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.09G033500.2.p |