PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.08G140300.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 455aa MW: 50231 Da PI: 5.0777 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.1 | 2.3e-34 | 223 | 277 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ Manes.08G140300.2.p 223 KPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 277 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.566 | 220 | 280 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.33E-18 | 221 | 277 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 6.9E-32 | 221 | 279 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.9E-25 | 223 | 277 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-10 | 225 | 276 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 5.1E-23 | 308 | 354 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MSSSLPVLPT PLEDKYQKLP DSFQVASERQ LIRNPVPLQA SQLGPDSGTT AHLFSSSLRI 60 PKELNTSSVS PQNSPFIRSS KDRGTLLVAP TYSSHSEAQS TTLISNSEEN KDISWSVDPL 120 YDLLDFPGNV TTQNGQVESN IGVIASEDLS KRTDWQEWAD QLISVDSDLE PNWSELLNDA 180 NATDTEQQVL KSSPEFSVQP QIHLYNGEPC AVANPISTAP STKPRMRWTP ELHEAFVEAV 240 NKLGGSERAT PKGVLKLMNV EGLTIYHVKS HLQKYRTARY KPESSEGTSE KKLSPIEEMK 300 SLDLKTSMGI TEALRLQMEV QKRLHEQLEI QRNLQLRIEE QGRHLQMMFE KQRKLEDGKS 360 KVSSSSLDDP TLLQSDAVLP SGNDKSEISE PDHAKTVSDR NDCGVALEKN SPSVSRKHKA 420 LENGTGEDLL DESSPASTKR ARANETAISS TSCI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-31 | 223 | 281 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.08G140300.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021621269.1 | 0.0 | protein PHR1-LIKE 1-like | ||||
Refseq | XP_021621270.1 | 0.0 | protein PHR1-LIKE 1-like | ||||
Swissprot | Q8GUN5 | 1e-111 | PHL1_ARATH; Protein PHR1-LIKE 1 | ||||
TrEMBL | A0A251KE80 | 0.0 | A0A251KE80_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_007430m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.2 | 1e-113 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.08G140300.2.p |
Publications ? help Back to Top | |||
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