PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G134500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 440aa    MW: 47012.9 Da    PI: 6.3313
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G134500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.54.4e-16235289357
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          + kr+rr+ +NRe+ArrsR+RK+a +  Le+ v +L  eN +L k+l+++++++ 
  Manes.08G134500.1.p 235 DAKRARRMLSNRESARRSRRRKQAHLTDLETQVSQLRVENASLLKRLSNISNKYN 289
                          57************************************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-19233297IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415235289IPR004827Basic-leucine zipper domain
PfamPF001701.0E-14236288IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-11237287No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-12237288No hitNo description
PROSITE patternPS000360240255IPR004827Basic-leucine zipper domain
PfamPF124981.3E-41304428IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MDRVFSVGEI SDQFWSLPPP PPPPAQTDDS SKMNRSESEW AFQRFLQEAS VVPVSASASD  60
SSPQSSSAPA GDKSDVVEMK DNDKTTASSS FTNGRCTTPF NVAAALGAPP NTAVGSEEYQ  120
AFLKSKLNLA CAAVALSRAP FLKPQDSPAR ADSGSQASNA SQLGSHAAPK EAGSDLPWSQ  180
DMDANGPVGI ASLPSTQKKF GATLKPTTSG SSREQSEDDE NEGETEITKD MDPTDAKRAR  240
RMLSNRESAR RSRRRKQAHL TDLETQVSQL RVENASLLKR LSNISNKYNG AAVDNRVLKA  300
DVETLRAKVK MAEETVKRIT GLNPLIHALP EISTISMSSF DGSPSDTSTD AAVPVNEDPN  360
HHFYQPPNNP MSVHESRVNN ALADISSVEN LQPHSGAAGL AGNMKGRTAS LQRVASLEHL  420
QKQIRRGITP GPQSNGEQI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249256RRSRRRKQ
2251256SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G134500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021620722.10.0light-inducible protein CPRF2-like
SwissprotQ990901e-129CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2C9VH940.0A0A2C9VH94_MANES; Uncharacterized protein
STRINGcassava4.1_007837m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-74bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]