PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.08G101700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Trihelix | ||||||||
Protein Properties | Length: 350aa MW: 38199.5 Da PI: 5.3679 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 89.5 | 3.7e-28 | 43 | 137 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Li++++ e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e + ++e++s +++ Manes.08G101700.1.p 43 RWTRQEILVLIQGKKVAENRVRRGRtagmafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWETQIREETESFWVM 132 8**********************97778888888**********************************************9999999*99 PP trihelix 82 fdqle 86 ++l+ Manes.08G101700.1.p 133 RNDLR 137 99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.1E-12 | 43 | 133 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 6.4E-5 | 43 | 108 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.4 | 43 | 109 | IPR017877 | Myb-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MVLVQPVTLS TNTVHGEPSN GVDNRPASID GGDDGSKAPR LPRWTRQEIL VLIQGKKVAE 60 NRVRRGRTAG MAFGSGQVEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWET 120 QIREETESFW VMRNDLRRER KLPGFFDREV YDILDGVGGV SPATPGLSLA LAPSTEPAED 180 VETVFDSGRS AAAEDGLFSD FEQEEAGGSP DKEATAAKEV PPIKAAAVGV AAPVPISEQQ 240 YQPEPALQAD QTQGTANEKQ PAPNTVEGSA SHENRKRKRL PTDSDEETTN IQNQLIDVLE 300 KNGKMLNAQL EAQNNNFQLD REQRKNHGDS LVAVLNKLAD ALGKIADKL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.08G101700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021621202.1 | 0.0 | trihelix transcription factor ASR3-like isoform X2 | ||||
Swissprot | Q8VZ20 | 1e-127 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A2C9VGB4 | 0.0 | A0A2C9VGB4_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_010880m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2165 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-128 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.08G101700.1.p |
Publications ? help Back to Top | |||
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