PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G095200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 353aa    MW: 39439.9 Da    PI: 9.4708
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G095200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.55.6e-3264117255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtpeLH +Fv+ave+LGG+++AtPk +l+lm+v+gL+++hvkSHLQ+YR+
  Manes.08G095200.1.p  64 PRLRWTPELHLCFVKAVERLGGQDRATPKLVLQLMNVNGLSIAHVKSHLQMYRS 117
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.1E-3160118IPR009057Homeodomain-like
PROSITE profilePS5129414.68360120IPR017930Myb domain
SuperFamilySSF466892.87E-1562118IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-2364119IPR006447Myb domain, plants
PfamPF002496.7E-1065116IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEGSDQTGCS KTKAYCRRNQ DESVSGEIDD DENRPKNGSS SSNSTVEESD KKISVRPYVR  60
SKMPRLRWTP ELHLCFVKAV ERLGGQDRAT PKLVLQLMNV NGLSIAHVKS HLQMYRSKKI  120
DDPSQVMADH RHLVESGDRN IYNLLQGYNQ RHGSSYRYGD ASWNARETFL NNPQMGRCSV  180
DETRQGLYGK VAERIFAGNS NSNWTNWKFH TGASSFSSQS CRKTEEMNSE LRPSHNPKFW  240
QPHSSSSFME LNHAAQFLKA KVGENNLFNR SNILISDMKS PASNLKDQVK PVKRKAADCN  300
LDLDLSLKLT VPGNDDSRRS LEDGEVDSEL SLSLFASSSS KAKLSRLKGG GG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-1865119357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1865119357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1865119357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1865119357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G095200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621379.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2C9VEY50.0A0A2C9VEY5_MANES; Uncharacterized protein
STRINGcassava4.1_030821m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-58G2-like family protein