PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.08G046700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 509aa MW: 56951.8 Da PI: 6.663 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.5 | 8.9e-11 | 216 | 250 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka++++Le L+ Manes.08G046700.1.p 216 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLT 250 7789***********************98554444 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.8E-9 | 209 | 258 | No hit | No description |
SMART | SM00338 | 1.1E-7 | 212 | 292 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.2E-8 | 213 | 257 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 214 | 258 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.27E-7 | 216 | 258 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 219 | 234 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.1E-29 | 308 | 381 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 509 aa Download sequence Send to blast |
MGFSRVLGGG VFEEEEEEEE QLEAKLLQSS FMATNKVINY STQIEQHQQN HHQHQQQQQQ 60 QQQHHHHQIQ EHHHHHQIPY GMMQSSSSSS VPGSFISKDA GAYDLGEFDQ ALFLYLDGQD 120 PSTVQDQRQT SGMRPPTLNI FPSQPMHVEP SSAKANTPVT SGSKRPSNQP SMELANARND 180 AASGPEPAKA IKREGNRKGP TTSSSEQEGP KTPDPKTLRR LAQNREAARK SRLRKKAYVQ 240 QLESSRIRLT QLEQELQRAR GQGIFFGGGG GLLGGDQGLP AGISTISSDA AVFDVEYTRW 300 LEEHHRLTCE LRAAVQEHLP ENELRLFVDN CLAQYDEVMS LKAMVAKSDV FHLVSGMWKT 360 PAERCFIWIG DFRPSDLIKI ILNQVEPLTE QQILGICGLQ QSTQEAEEAL SQGLEALNQS 420 LSDTIASDSL SCPPNMGNYM GQMAVAMNKL STLEGFVRQA DNLRHQTLHR LHQLLTARQA 480 ARCFLSIAEY FHRLRALSTL WLARPRQE* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.08G046700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021620140.1 | 0.0 | bZIP transcription factor TGA10-like isoform X2 | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A2C9VF07 | 0.0 | A0A2C9VF07_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_025203m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4731 | 34 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-174 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.08G046700.1.p |