PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G021600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 200aa    MW: 21599.2 Da    PI: 5.2823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G021600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-183181155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  Manes.08G021600.1.p 31 PVYRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 81
                         68*****888.8*********94....478***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-113181IPR001471AP2/ERF domain
PROSITE profilePS5103223.1693289IPR001471AP2/ERF domain
SMARTSM003801.2E-343295IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-303291IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-213291IPR016177DNA-binding domain
PRINTSPR003676.2E-113344IPR001471AP2/ERF domain
CDDcd000183.63E-313391No hitNo description
PRINTSPR003676.2E-117191IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MHYSQSSNSG NSAAANQLRA TAPSAVSGRH PVYRGVRRRS SGKWVSEIRE PRKPNRIWLG  60
TFPTPEMAAV AYDVAALALK GRDAELNFPN SASSLPVPVS TSPRDIQAAA ASAAAAVGAA  120
RDALGIGSYR QESTNQTVVQ ERPMFNEFVD EDLIFDMPNV LMNMAEGMLL SPPRLDIAGD  180
EYADDPYSGL MDQNLWRFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-162591774Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G021600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621703.11e-144ethylene-responsive transcription factor ERF024
SwissprotQ9SJR03e-59ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2C9VCX71e-143A0A2C9VCX7_MANES; Uncharacterized protein
STRINGcassava4.1_031718m1e-144(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-50ERF family protein