PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.07G132500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 365aa    MW: 41272.9 Da    PI: 7.0265
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.07G132500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.8e-3272125255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH +Fv+ave+LGG+ekAtPk +l+lm++kgL+++hvkSHLQ+YR+
  Manes.07G132500.1.p  72 PRLRWTPDLHLCFVHAVERLGGQEKATPKLVLQLMNIKGLSIAHVKSHLQMYRS 125
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.96168128IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-3068126IPR009057Homeodomain-like
SuperFamilySSF466891.61E-1470126IPR009057Homeodomain-like
TIGRFAMsTIGR015575.0E-2372127IPR006447Myb domain, plants
PfamPF002493.9E-973124IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MMKRSDSFHG SKSSYSCKKV SQDDEADEEA DKSCSCKPRN DGDTTSNSSD EESDKKEGAS  60
RSVRQYIRSK MPRLRWTPDL HLCFVHAVER LGGQEKATPK LVLQLMNIKG LSIAHVKSHL  120
QMYRSKKLDD ANQGQRLLFE GGAHNIFKLS QLPMLQGFNQ RNFTSLRFGD APWRGLDHHQ  180
IYGSFMKHHN SLDYDSNIIN IKSSSFNGQN IINGTHQPLE SIHRSWKMGS SKPSSLDFKY  240
IKLQEREADV TEAEKEEEEE EEEEDCFKNH NKNWRTIQET GNMLKRKNLD ADCNLDLNLS  300
LKVTLQDGIE NGLKSDRCDN EVNSSLSLSL SSSSSSKPSG LKQEDDEDGS RKHARRASTL  360
GLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-1773127357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-1773127357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-1773127357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-1773127357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.07G132500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021618782.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2C9VL680.0A0A2C9VL68_MANES; Uncharacterized protein
STRINGcassava4.1_023609m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-46G2-like family protein