PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.07G132100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Trihelix | ||||||||
Protein Properties | Length: 361aa MW: 40529.2 Da PI: 8.6351 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.7 | 1.5e-13 | 103 | 186 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Liea ++ +l+rg+l++++W+ev++ + r+ g+ +++ +qCk++++ l+k+yk +k+ s++p++ +l+ Manes.07G132100.1.p 103 CWSEGATETLIEAWGDRYINLNRGNLRQKDWKEVADTVngRQNGVkpRKTDVQCKNRIDTLKKKYKLEKAKPPP------SKWPFYYRLD 186 7*************************************998888865679******************999886......5799999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.8E-26 | 101 | 188 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence Send to blast |
MLIIQTLPYK VISRLTPIRE ADVIAGLNAR PSLPLPLSTS PTNPILFSII LHPLSLRRTL 60 APSAIHSPTS HTPLPLFPMD PIRSVHHSTR PSASGGGGGR EDCWSEGATE TLIEAWGDRY 120 INLNRGNLRQ KDWKEVADTV NGRQNGVKPR KTDVQCKNRI DTLKKKYKLE KAKPPPSKWP 180 FYYRLDSLIG ANATVNPKKK AAAATFPVKS TPSIKPELYT GVSNSTEASF DDEKDEDDDD 240 IGFDERAIKK QHRIEDVDFS DGAACRELAR AILKFGEIYE RIESSKQQQM VELEKQRMEF 300 TKELEFERMN MFMDAQLELE KKSSKRSKYA SSGSVCLASY LCLFLQDAHA CTNRHSETCM 360 * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00488 | DAP | Transfer from AT5G05550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.07G132100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021618389.1 | 0.0 | trihelix transcription factor ASIL2 isoform X1 | ||||
Refseq | XP_021618390.1 | 0.0 | trihelix transcription factor ASIL2 isoform X1 | ||||
Refseq | XP_021618391.1 | 0.0 | trihelix transcription factor ASIL2 isoform X1 | ||||
Refseq | XP_021618392.1 | 0.0 | trihelix transcription factor ASIL2 isoform X1 | ||||
Swissprot | Q9LJG8 | 2e-34 | ASIL2_ARATH; Trihelix transcription factor ASIL2 | ||||
TrEMBL | A0A2C9VNI8 | 0.0 | A0A2C9VNI8_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_013408m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1887 | 33 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05550.1 | 9e-70 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Manes.07G132100.1.p |