PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.07G131800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | MYB_related | ||||||||
Protein Properties | Length: 188aa MW: 20264.5 Da PI: 5.7812 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.5e-15 | 3 | 37 | 11 | 47 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +v+a++++G++ W+tIar ++ gRt++ +k++w++ Manes.07G131800.1.p 3 TIVQAHALHGNK-WATIARLLP-GRTDNAIKNHWNST 37 68**********.*********.***********986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 23.469 | 1 | 42 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.8E-16 | 1 | 39 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.58E-11 | 1 | 42 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 8.2E-6 | 1 | 40 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 9.52E-10 | 1 | 38 | No hit | No description |
Pfam | PF00249 | 8.0E-12 | 2 | 37 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
DATIVQAHAL HGNKWATIAR LLPGRTDNAI KNHWNSTLRR KRAADLSSAS SESNSVMKRP 60 YVDVSVESGS GSDSGVKNKR QSLGASPEYS SFDGDARIMG PETSLTLSPP GDGFVSVATV 120 GEKVEEVEVN GGEECGERRR ENKCGVQIEE TCLLTIMQRM IAAEVRSYID RLRAEDGLDG 180 PSTRKDL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1mbj_A | 1e-15 | 1 | 41 | 11 | 51 | MYB PROTO-ONCOGENE PROTEIN |
1mbk_A | 1e-15 | 1 | 41 | 11 | 51 | MYB PROTO-ONCOGENE PROTEIN |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.07G131800.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021618027.1 | 1e-136 | transcription factor MYB44-like | ||||
TrEMBL | A0A2C9VL20 | 1e-135 | A0A2C9VL20_MANES; Uncharacterized protein (Fragment) | ||||
STRING | cassava4.1_022961m | 1e-133 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF11600 | 29 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09230.1 | 2e-18 | myb domain protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Manes.07G131800.1.p |