PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G071500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 401aa    MW: 44292.6 Da    PI: 6.6167
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G071500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33e-32230285156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W+peLH+rF++a++qLGGs+ AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  Manes.06G071500.1.p 230 KQRRCWSPELHRRFLHALQQLGGSHAATPKQIREIMKVDGLTNDEVKSHLQKYRLH 285
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-29227288IPR009057Homeodomain-like
PROSITE profilePS5129414.933227287IPR017930Myb domain
SuperFamilySSF466896.09E-18229288IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-27230285IPR006447Myb domain, plants
PfamPF002494.7E-7232283IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MDFAEKMQRC HEYVEALEEE KRKIQVFQRE LPLCLELVTQ AIEACRRELS GTTTEYMHGQ  60
SECSEQTLSE GTRPVLEEFI PIKRTHSSSD NDNDDDDEND NDDQEQHSHK RNKTVVNNSG  120
SSNNKDKNSS DHRKKSDWLR SVQLWNQSPD PSPEEDVPRK AVVTELKRNG GAFQPFQKEK  180
TTGKSIQTIA KTPSSVPASA TSSTADTGTG AGIVGGSERK EEKNGQNERK QRRCWSPELH  240
RRFLHALQQL GGSHAATPKQ IREIMKVDGL TNDEVKSHLQ KYRLHTRRPS PAIHNNSNPQ  300
AAPQFVVVGG IWVPPPEYAA VATTTASGET STLAAAAANG IYAPVAAPPP TSHQMLQKQE  360
HTQSEQMQSE ERGSHSEDGV RSNSPATSSS THTTTNSPLF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-13230283154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-13230283154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-13230283154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-13230283154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-13230283255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00160DAPTransfer from AT1G25550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G071500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616746.10.0transcription factor HHO3-like
SwissprotQ9FPE81e-118HHO3_ARATH; Transcription factor HHO3
TrEMBLA0A2C9VQR90.0A0A2C9VQR9_MANES; Uncharacterized protein
STRINGcassava4.1_009038m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.11e-107G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]