PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.06G019400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 124aa MW: 14769.1 Da PI: 9.9066 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.2 | 4.2e-09 | 17 | 53 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 k+ +r+++NRe+ArrsR R+++ ie L ++ +eLe++ Manes.06G019400.1.p 17 KKRKRMISNRESARRSRMRRQKNIEDLINEKAELEEK 53 899************************9999999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-5 | 13 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-6 | 14 | 53 | No hit | No description |
Pfam | PF07716 | 2.5E-6 | 15 | 55 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.117 | 15 | 53 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.66E-8 | 17 | 70 | No hit | No description |
CDD | cd14702 | 1.28E-10 | 18 | 52 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 20 | 35 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006521 | Biological Process | regulation of cellular amino acid metabolic process | ||||
GO:0009267 | Biological Process | cellular response to starvation | ||||
GO:0009617 | Biological Process | response to bacterium | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009901 | Biological Process | anther dehiscence | ||||
GO:0010182 | Biological Process | sugar mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MLFKLLKKSS NVTIDEKKRK RMISNRESAR RSRMRRQKNI EDLINEKAEL EEKINDDYHK 60 CREKWQILLV LESENEVLRD KKMGLISYLK FLNQILVDYK ETEDSNHVHG PAQQVKACEM 120 SKF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.06G019400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021615785.1 | 5e-85 | basic leucine zipper 1-like | ||||
TrEMBL | A0A2C9VPK3 | 1e-83 | A0A2C9VPK3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_028972m | 7e-70 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15536 | 8 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49450.1 | 2e-11 | basic leucine-zipper 1 |
Link Out ? help Back to Top | |
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Phytozome | Manes.06G019400.1.p |