PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.05G192300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Dof | ||||||||
Protein Properties | Length: 245aa MW: 27157.2 Da PI: 9.1257 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.9 | 2.2e-38 | 19 | 79 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC+stntkfCyynnyslsqPry+Ck+CrryWt GG+lrnvPvGgg+rknk+ s Manes.05G192300.1.p 19 KDRALNCPRCNSTNTKFCYYNNYSLSQPRYLCKTCRRYWTDGGSLRNVPVGGGSRKNKRPS 79 68899*****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-29 | 12 | 77 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.2E-33 | 21 | 77 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.723 | 23 | 77 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 25 | 61 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MEVSRPTTTL ERSKVRPQKD RALNCPRCNS TNTKFCYYNN YSLSQPRYLC KTCRRYWTDG 60 GSLRNVPVGG GSRKNKRPSS VSSSLEQLPD FTTTPQASQN PKIHQDRDLN LAYPPSNQDY 120 GNVSKFARNL NPSSSSSVPS HHISAMDLLK TGMTSRGLGP LISLPVADPN TVNSTGFSLQ 180 EFKPTLNFFL EGFASGGYEN IQGVQETGPR LLFPMEELKP VPGNTEYDQN REQGDTSGFW 240 NGIY* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.05G192300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021612980.1 | 0.0 | dof zinc finger protein DOF3.7-like | ||||
TrEMBL | A0A2C9VXU0 | 0.0 | A0A2C9VXU0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_014280m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF674 | 34 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.4 | 3e-47 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.05G192300.1.p |