PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.05G183200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 155aa MW: 18007.5 Da PI: 10.3083 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.1 | 9e-14 | 59 | 109 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++ rr+++NRe+ArrsR RKk+ +e+L+ v Le++N++Lkk+l + + Manes.05G183200.1.p 59 RKRRRMISNRESARRSRWRKKKHLENLTVQVNRLETQNRELKKRLGSVLGQ 109 5789****************************************9876555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-14 | 55 | 126 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.887 | 57 | 106 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-11 | 57 | 110 | No hit | No description |
SuperFamily | SSF57959 | 4.71E-12 | 59 | 114 | No hit | No description |
Pfam | PF00170 | 5.9E-12 | 59 | 111 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.82E-17 | 60 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 155 aa Download sequence Send to blast |
MLFAQDPVQL QYPLPETGFT APEIEELLSL FELPIHSPNS GSEGSNSNSN RVIFSVDERK 60 RRRMISNRES ARRSRWRKKK HLENLTVQVN RLETQNRELK KRLGSVLGQC HVLWRENDRL 120 TTEYLSLQAR LQDLCHAIVV MHDFQRPKQL SSSI* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 58 | 62 | RKRRR |
2 | 60 | 79 | RRRMISNRESARRSRWRKKK |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.05G183200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021649733.1 | 2e-77 | basic leucine zipper 4-like | ||||
TrEMBL | A0A2C9VXE5 | 1e-109 | A0A2C9VXE5_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_031242m | 1e-110 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49760.1 | 1e-22 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.05G183200.1.p |