PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G083900.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 447aa    MW: 48433.9 Da    PI: 6.3835
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G083900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.7e-16223278459
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                           kr+rr+q+NRe+ArrsR+RK+a++ eLe+ v  L  e+++L  +l  ++k+++  
  Manes.05G083900.2.p 223 EKRARRMQSNRESARRSRRRKQAQLNELETQVGHLRDERTSLLTRLTDINKKCDDA 278
                          69**************************************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-11219276No hitNo description
SMARTSM003387.3E-18220284IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.519222274IPR004827Basic-leucine zipper domain
PfamPF001708.2E-13224276IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.98E-10224273No hitNo description
PROSITE patternPS000360227242IPR004827Basic-leucine zipper domain
PfamPF124981.1E-31291419IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MNSIFSVDDF SDLLWPPMPA HPPVMSRSPS EWELEKFLEE FPVPTSSSTS DSIPSAVSES  60
PTLSRPRNGE DDVVEIEKPE IHPSPPPVPL PPRNRLHQPS DRASLAPADS EDYRAFLKSQ  120
LDLACAAAAK ARPEGITSLA EEQSVATKNL QPGSQVSGDS NGISKAQGEA DGGSLRLPAL  180
PSTQRKQEVP ARQTTSGSSR EDSDDDDLDG DTETNEHMDP ADEKRARRMQ SNRESARRSR  240
RRKQAQLNEL ETQVGHLRDE RTSLLTRLTD INKKCDDAAV DNRILNANIE TLRTKVKMAE  300
DQVKRVTGLN PMLLARSSMP SMGMQFVTGQ TDAPASVAVP MQQNNHFFHH SVPNIPSGAP  360
HLQGLNNSCP NKNLTSHATI PQGDNGTSNI GGRTPMQPLT ATAQAMADAP PMQHVQKQTV  420
PSVGPAALPR CNNGLSHPVA KDNKKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236243RRSRRRKQ
2238243SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G083900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021613750.10.0light-inducible protein CPRF2 isoform X2
TrEMBLA0A2C9VUG50.0A0A2C9VUG5_MANES; Uncharacterized protein
STRINGcassava4.1_007487m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-42basic leucine zipper 25