PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.05G083900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 452aa MW: 48991.5 Da PI: 6.3842 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 5.8e-16 | 228 | 283 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr+rr+q+NRe+ArrsR+RK+a++ eLe+ v L e+++L +l ++k+++ Manes.05G083900.1.p 228 EKRARRMQSNRESARRSRRRKQAQLNELETQVGHLRDERTSLLTRLTDINKKCDDA 283 69**************************************************9865 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-11 | 224 | 281 | No hit | No description |
SMART | SM00338 | 7.3E-18 | 225 | 289 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.519 | 227 | 279 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.0E-13 | 229 | 281 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.06E-10 | 229 | 278 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 232 | 247 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.6E-31 | 296 | 424 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 452 aa Download sequence Send to blast |
MNSIFSVDDF SDLLWPPMPA HPPVMSRSPS EWELEKFLEE FPVPTSSSTS DSIPSAVSES 60 PTLSRPRNGE DDVVEIEKPE IHPSPPPVPL PPRNRLHQPS DRASLAPADS EDYRAFLKSQ 120 LDLACAAAAK ARESNVKPEG ITSLAEEQSV ATKNLQPGSQ VSGDSNGISK AQGEADGGSL 180 RLPALPSTQR KQEVPARQTT SGSSREDSDD DDLDGDTETN EHMDPADEKR ARRMQSNRES 240 ARRSRRRKQA QLNELETQVG HLRDERTSLL TRLTDINKKC DDAAVDNRIL NANIETLRTK 300 VKMAEDQVKR VTGLNPMLLA RSSMPSMGMQ FVTGQTDAPA SVAVPMQQNN HFFHHSVPNI 360 PSGAPHLQGL NNSCPNKNLT SHATIPQGDN GTSNIGGRTP MQPLTATAQA MADAPPMQHV 420 QKQTVPSVGP AALPRCNNGL SHPVAKDNKK K* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 241 | 248 | RRSRRRKQ |
2 | 243 | 248 | SRRRKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.05G083900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021613749.1 | 0.0 | light-inducible protein CPRF2 isoform X1 | ||||
TrEMBL | A0A2C9VVX5 | 0.0 | A0A2C9VVX5_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_007487m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13691 | 18 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54620.1 | 8e-44 | basic leucine zipper 25 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.05G083900.1.p |