PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G026700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 420aa    MW: 44480.4 Da    PI: 8.7217
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G026700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.11.7e-22274336163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e++lkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L++eN+aLk+e+++l+++++kl+ e+
  Manes.05G026700.1.p 274 ERQLKRERRKQSNRESARRSRLRKQAETEELAHKVESLTSENMALKSEINQLTEKSEKLRLEN 336
                          799********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.1E-36194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-18127242No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-18268333No hitNo description
PfamPF001701.2E-20274336IPR004827Basic-leucine zipper domain
SMARTSM003386.5E-22274338IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.346276339IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-11277333No hitNo description
CDDcd147021.01E-21279328No hitNo description
PROSITE patternPS000360281296IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MGNNEEGKSS NPDKSSSPGP LDQTNVHVYP DWAAMQAYYG PRVALPPYYN SAVASGHAPH  60
PYMWGPPQPM MPPYGAPYAA VYSHGGVYAH PTVPIGLHPH VPGVPSSPAS ATPVNVETPT  120
KSAGNTDRGL IKKLKRFDGL AMSIGNGSSN GDSADGGSQR LSQSVETEGS SDGSDGNTAG  180
GRKRCCEGPP NTGGEVRTEM QASSVPTGEK NATSDKVLGA AVVSSGILGK SEGPVVSPRM  240
SALGKPPVNA AKTGVTSIPQ PCQVLPSEAW FQNERQLKRE RRKQSNRESA RRSRLRKQAE  300
TEELAHKVES LTSENMALKS EINQLTEKSE KLRLENAALL EKLKNSHVGH AHEIILNSSN  360
EQRATVISTE NLLSRVNSSA SVDRNSGEER ELYERNSNSG AKLHQLLGAS PRADAVAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290296RRSRLRK
2290297RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G026700.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021613119.10.0common plant regulatory factor 1-like isoform X2
SwissprotQ990891e-149CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2C9VSR40.0A0A2C9VSR4_MANES; Uncharacterized protein
STRINGcassava4.1_008459m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-104G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]