PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G157200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 441aa    MW: 48563.3 Da    PI: 5.9154
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G157200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11.1e-09156195645
                          HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                            rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Manes.04G157200.1.p 156 TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 195
                          579************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-8149198No hitNo description
SMARTSM003387.3E-7151214IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117153197IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-7155198No hitNo description
CDDcd147088.01E-22155207No hitNo description
PfamPF001707.0E-7155195IPR004827Basic-leucine zipper domain
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
PfamPF141441.5E-31237312IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MGSRVGLEDE KEANGMLSFD PQLPISNALG IEGSTIHPYR VSGFGLFEQS VAFHFEDVVD  60
LSTNTVFNSA KASSQEVSSD PLNIGTSDKL TTSLNINPSA AQVESQRLPP EKKQQLNLVS  120
ISSGNTENWG ESNMADASPR TDISTDGDTD DKNPRTLRRL AQNREAARKS RLRKKAYVQQ  180
LESSRLKLTQ LEQELQRARQ QGVFISSSGD QAHSMSGNGA MAFDVEYARW LEEQNRQINE  240
LRSAVNTHAG DTELRIIIDG IMAHYDEIFR LKGNAAAADV FHLLSGMWKT PAERCFLWLG  300
GFRSSELLKL LVNQLEPLTE QQLVGIGNLQ QSSQQAEDAL SQGMEALQQS LAETLSSGSL  360
GSSSSSGNVA NYMGQMAMAM GKLGTLEGFI RQADNLRQQT LQQMHRILTT RQSARALLAI  420
HDYFSRLRAL SSLWLARPRE *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G157200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021609870.10.0transcription factor TGA2-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A2C9W2Y10.0A0A2C9W2Y1_MANES; Uncharacterized protein
STRINGcassava4.1_007074m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-157TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]