PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G082600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 599aa    MW: 65256.9 Da    PI: 6.605
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G082600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10426483562
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+++
  Manes.04G082600.1.p 426 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 483
                          9********************************************9998877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-17422486IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737424487IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-10426482No hitNo description
PfamPF001701.1E-8426480IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.45E-11426477No hitNo description
CDDcd147034.49E-24427476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MGDTEEANSE MMQRLHSSFG TTQSSSSMPK QPFLSMNQLD IPQLNQTQIR ARHFAHFAQN  60
FSSDNSKRVG IPPSHPNQIP PISPYSQIPV SRPASQQMAS PNFTPGPTHS RSLSQPSSFF  120
SLDSLPPLSP ATFRDSSSTS ASDPISVDVS MEERDGSSHS LLPPSPFSRS NTSRVGESLP  180
PRKTHRRSNS DIPFGFTNVL QSSPPLVQLR GSGALERSVS GKENSGVGKP VQLVKKEWER  240
GGDSNAEGMG ERKSEGEVVD DLFSAYMNLD TIDALNSSGT DDKNGNENRE DLDSRASGTK  300
TNGGESSDNE AESSVNESGS SLPRGLSPST EKREGIKRSA GGDIAPTTRH YRSVSMDSFM  360
GKLNFGDESP KLPPSPGTRP GQLSPSNSLD GNAFSLEFGN GEFSGAELKK IMANEKLAEI  420
AISDPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ TEATTLSAQL TLLQRDSVGL  480
TNQNNELKFR LQAMEQQAQL RDALNEALTA EVRRLKIATA EISGDSDPTK GMVQQLSINP  540
QLFQLQQPQS SQLNMHQLQQ QQQSSSSMNM HQLQQQQMQL TQPQQQNGNT SSNAESNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G082600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021610187.10.0transcription factor RF2a-like
TrEMBLA0A2C9W0K30.0A0A2C9W0K3_MANES; Uncharacterized protein
STRINGcassava4.1_004047m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-142bZIP family protein