PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.04G033900.2.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

Dof

Protein Properties

Length: 234aa MW: 24624.6 Da PI: 10.0312

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.04G033900.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	26.9	9.9e-09	21	41	42	62
zf-Dof 42 kGGalrnvPvGggrrknkkss 62 +GGalrnvPvGgg+r+nkk++ Manes.04G033900.2.p 21 RGGALRNVPVGGGCRRNKKNK 41 7*****************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-6	1	34	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MADRARLAKI PLPETTLKCP RGGALRNVPV GGGCRRNKKN KSQSRSKSPA SSERQMGSCS 60 NSTSAVPSEI IGHFPPQPSQ LPLMTSLHNL TQFGIANLGL NFGGIQGNMG ANSGAGGQTD 120 MGFQIGSNSG MSSAVLSTGG VQQFPFFEPT PTGLYPFQTE GVEASSSMVV DTQLRSMTSS 180 SRVSQLAPVK MEDNHRLNLS KPFLGISESN QYWSGNTWTD LSGLNSSSSS HLL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.04G033900.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021609629.1	1e-168	dof zinc finger protein DOF2.2-like isoform X2
TrEMBL	A0A2C9VZ99	1e-168	A0A2C9VZ99_MANES; Uncharacterized protein
STRING	cassava4.1_029949m	1e-159	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.2	9e-21	Dof family protein

Link Out ? help Back to Top
Phytozome	Manes.04G033900.2.p