PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G033900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Dof
Protein Properties Length: 289aa    MW: 30371 Da    PI: 9.2695
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G033900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof26.61.3e-0876964262
               zf-Dof 42 kGGalrnvPvGggrrknkkss 62
                         +GGalrnvPvGgg+r+nkk++
  Manes.04G033900.1.p 76 RGGALRNVPVGGGCRRNKKNK 96
                         7*****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-95289IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MVFSSAPVYL DPPNWQQQPN QQGGATNENL HLPPLPLPPP PHVGDGGIGS VRPGSMADRA  60
RLAKIPLPET TLKCPRGGAL RNVPVGGGCR RNKKNKSQSR SKSPASSERQ MGSCSNSTSA  120
VPSEIIGHFP PQPSQLPLMT SLHNLTQFGI ANLGLNFGGI QGNMGANSGA GGQTDMGFQI  180
GSNSGMSSAV LSTGGVQQFP FFEPTPTGLY PFQTEGVEAS SSMVVDTQLR SMTSSSRVSQ  240
LAPVKMEDNH RLNLSKPFLG ISESNQYWSG NTWTDLSGLN SSSSSHLL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G033900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021609629.10.0dof zinc finger protein DOF2.2-like isoform X2
TrEMBLA0A2C9VZ620.0A0A2C9VZ62_MANES; Uncharacterized protein
STRINGcassava4.1_029949m1e-170(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28810.21e-20Dof family protein