PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G111600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Dof
Protein Properties Length: 341aa    MW: 35552.3 Da    PI: 9.2245
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G111600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.14.7e-3971130362
               zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                          e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  Manes.03G111600.1.p  71 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 130
                          7789*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1014473.92E-63241No hitNo description
ProDomPD0074782.0E-3054119IPR003851Zinc finger, Dof-type
PfamPF027017.5E-3373128IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.60974128IPR003851Zinc finger, Dof-type
PROSITE patternPS01361076112IPR003851Zinc finger, Dof-type
SuperFamilySSF1014473.92E-6316331No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MDSLSLSLDQ PSYHHHQPGA TSGLNSNQLP PPPPPPPPPP PPQPHGSGGA GSIRPGSMAD  60
RARLANIPMP EAALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRNVPVG  120
GGCRRNKRSK GRSSKSPASS DRPTGSGSSS TVSSNSGTSD ILGLGPQLPP LRFMAPLHHL  180
TEFATGDIGL NYGSLSAPVG GPSDLNFQIG SALASAGIGG SSSSLLSVGG LDQWRTQQGQ  240
QFPFLGGLDS SSSSGLYPFE GGAEPPGYSS GLGQLRPKIS TSGATQLASL KLEDNNTNNN  300
NQELNLSRQF LGIPGNDQYW GGTAWTDLSS FSSSSTSNPL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G111600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021607677.10.0dof zinc finger protein DOF5.1-like, partial
TrEMBLA0A2C9W6E80.0A0A2C9W6E8_MANES; Uncharacterized protein
STRINGEOY075471e-141(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.19e-40DNA binding with one finger 2.4