PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.02G109000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 276aa MW: 30774.3 Da PI: 8.5108 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.7 | 1.2e-08 | 184 | 223 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 ++r +r++kNRe+A rsR a++ eLe +v L +eN +Lk Manes.02G109000.1.p 184 DRRHKRMIKNRESAARSR----AYTTELELEVRHLMEENARLKR 223 689**************9....7*******************96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-5 | 181 | 244 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.5E-8 | 185 | 225 | No hit | No description |
CDD | cd14707 | 1.69E-22 | 185 | 230 | No hit | No description |
SuperFamily | SSF57959 | 3.02E-7 | 185 | 227 | No hit | No description |
Pfam | PF00170 | 6.6E-7 | 185 | 224 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 276 aa Download sequence Send to blast |
MLSSTAGEAT AQTKTLNRVS SSSSTSSSPS PFSPSDIHHK GKTMEEVWKD INLASLHDHP 60 SGDQDLSFTP RLHNPHHNPN FILQDFFARP FSKDTPTRIV SAHVESGLCG SSVPPPATIL 120 SLNSGPVFDF LDNSDPLRPA SHLPSRPVSN FSSFNSSLEA LDSSSGMPSF GKKRVQESDN 180 SSGDRRHKRM IKNRESAARS RAYTTELELE VRHLMEENAR LKRQQGEFPS FWGERERYGC 240 FCDEGDGCKC SKKNSCFKER RWLCRKKEIV SLHHP* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.02G109000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021603399.1 | 1e-142 | protein FD-like | ||||
Swissprot | Q84JK2 | 1e-49 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2C9WCV9 | 0.0 | A0A2C9WCV9_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_021412m | 1e-163 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35900.1 | 8e-52 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.02G109000.1.p |