PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.02G085100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 24392.2 Da PI: 8.5694 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.7 | 1.7e-11 | 171 | 191 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dgy+WrKYGqK vk+s++pr Manes.02G085100.2.p 171 EDGYRWRKYGQKAVKNSPYPR 191 8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.5E-12 | 155 | 191 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.11E-9 | 163 | 192 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.391 | 165 | 191 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.2E-5 | 170 | 206 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-7 | 171 | 191 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MSSEEKNPFQ YNPFNYNEQR GIPAGSVFPF LNDGPSPVQT IQGSDPLYMS FTESLSMDYN 60 TLSRAFCMPA ICSSSEVISP IQAYFSREIG APAGADENTS TPDSSSISSP SNDAATQQGA 120 AGKSKEKQQP KEYEDAKENS NNKVSKKKKK EKKEREARFA FLTKSEIDHL EDGYRWRKYG 180 QKAVKNSPYP RFIPLNNSLT MHFYKAFFYF YILNVS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.02G085100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC485277 | 7e-31 | KC485277.1 Jatropha curcas WRKY transcription factor 25 (WRKY25) gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021604175.1 | 1e-138 | probable WRKY transcription factor 71 | ||||
TrEMBL | A0A2C9WC28 | 1e-158 | A0A2C9WC28_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_015949m | 1e-159 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 2e-19 | WRKY DNA-binding protein 71 |
Link Out ? help Back to Top | |
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Phytozome | Manes.02G085100.2.p |