PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.02G082300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 220aa MW: 24388.9 Da PI: 4.0819 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 33.5 | 9.5e-11 | 194 | 218 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt eLH++F++av+ LGG++ Manes.02G082300.1.p 194 KPRLRWTFELHQCFLKAVNDLGGPK 218 79*********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.6E-8 | 192 | 218 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MNVFPSGDVG DVPAANAQPG VDGSENVKGV PTSLTDLGFS SEFERQLQLE NDPELKFISL 60 HELDNDDVFL ALHDIIVTRN TNMAYDHVHS EMTVMDSTPN MVRSHGFSSG ENPPFNFGYD 120 QFFSSDDKGK GVVVDETPSH NFVLDHVGPY KETEVVTPTL DMANVDYDFP FEEMGDDQSQ 180 ELQPPSVLFT TDLKPRLRWT FELHQCFLKA VNDLGGPKS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.02G082300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021681739.1 | 3e-41 | two-component response regulator EHD1-like isoform X2 | ||||
Refseq | XP_021681741.1 | 1e-41 | two-component response regulator EHD1-like isoform X4 | ||||
TrEMBL | A0A2C9WC32 | 1e-159 | A0A2C9WC32_MANES; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18800 | 5 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G06020.1 | 8e-09 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.02G082300.1.p |