PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G249900.3.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 424aa    MW: 44912 Da    PI: 9.3236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G249900.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_162.39e-20278340163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkrerrkq+NRe+ArrsR+RK+ae eeL++kv++L++eN aLk+e+++l ++++kl+ e+
  Manes.01G249900.3.p 278 ERELKRERRKQSNRESARRSRLRKQAESEELARKVESLTSENLALKSEMNQLIEKSEKLRLEN 340
                          89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-35194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.0E-20127257No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-16271337No hitNo description
PfamPF001704.5E-18278340IPR004827Basic-leucine zipper domain
SMARTSM003385.6E-17278342IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.116280343IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10281336No hitNo description
CDDcd147022.62E-18283332No hitNo description
PROSITE patternPS000360285300IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MGNNEDGKSS KPEKSSSPVP VDQTNFHVYP DWAAMQAYYG PRVALPPYYN SAIASGHAPH  60
PYMWGPPQPI MPPYGAPYAA VYSHGGVYAH PAVPIGSHPH VPGVPSAPAA ATPVSVETPT  120
KSTGNTDQGL MKKLKRFDGL AMSIGNASSN TESAEGGDHR LSQSVETEGS SDGSDGNTAG  180
GRKRSCEGKP TIAVGEMRTE TQARSVPTGK VGGSPDKVLV AAAASASASG KSLGAVVSSG  240
MSTALELRNP PMDAAKANAA NIPQPCQVLP SEAWIQNERE LKRERRKQSN RESARRSRLR  300
KQAESEELAR KVESLTSENL ALKSEMNQLI EKSEKLRLEN AALLEKLKNS QLGRKQEVIL  360
NGSEKQSASA VSTENLLSRV SNSTSVDRSK GEDEELYERS SNPRAKLHQL LGASPRTDAV  420
AAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294300RRSRLRK
2294301RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G249900.3.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1644269e-35AB164426.1 Psophocarpus tetragonolobus WBR2 mRNA for bZip transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021612173.10.0common plant regulatory factor 1 isoform X1
RefseqXP_021612182.10.0common plant regulatory factor 1 isoform X1
RefseqXP_021612191.10.0common plant regulatory factor 1 isoform X1
SwissprotQ990891e-150CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A251LVK30.0A0A251LVK3_MANES; Uncharacterized protein
STRINGcassava4.1_008339m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-110G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]