PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.01G202200.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 305aa MW: 33595.1 Da PI: 4.6623 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.6 | 1.7e-15 | 225 | 284 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr rr+q+NRe+ArrsR+RK+a++ eLe +v +L e ++L +l ++k++++ e+ Manes.01G202200.2.p 225 EKRVRRMQSNRESARRSRRRKQAQLSELEAEVGQLRDECTSLLTRLTDINKKCDEASVEN 284 69***************************************************9877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-12 | 221 | 278 | No hit | No description |
SMART | SM00338 | 8.2E-17 | 222 | 286 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.312 | 224 | 276 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-10 | 226 | 275 | No hit | No description |
Pfam | PF00170 | 1.8E-13 | 226 | 279 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 229 | 244 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MSGIFYVDDF SDLLWQPPVH ALAMSRSASE WELLEEFFAH ASASARENNS PFVVQSPTSR 60 KPLNSDDGVV EIENPEIPAP TPLPLAPLSR DRPPRPSHRA ILSQVDAEDY PAFLKSQLDL 120 TYAAAAKSRE SSVKPEGASS LPEDQIVASK NFQSGSHVSG NGDCILKAQS EADGGSLCFP 180 ALPPTQKKQD VPARQTTSQS SREDSDDDDL DGDTETNDHM DPADEKRVRR MQSNRESARR 240 SRRRKQAQLS ELEAEVGQLR DECTSLLTRL TDINKKCDEA SVENRILNAN IETLRTKVNS 300 YCIV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 238 | 245 | RRSRRRKQ |
2 | 240 | 245 | SRRRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.01G202200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021607372.1 | 0.0 | light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2C9WMA6 | 0.0 | A0A2C9WMA6_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_008866m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 2e-31 | basic leucine zipper 25 |
Link Out ? help Back to Top | |
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Phytozome | Manes.01G202200.2.p |