PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G202200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 430aa    MW: 46966 Da    PI: 5.7798
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G202200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.92.9e-15225284463
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           kr rr+q+NRe+ArrsR+RK+a++ eLe +v +L  e ++L  +l  ++k++++   e+
  Manes.01G202200.1.p 225 EKRVRRMQSNRESARRSRRRKQAQLSELEAEVGQLRDECTSLLTRLTDINKKCDEASVEN 284
                          69***************************************************9877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-12220278No hitNo description
SMARTSM003388.2E-17222286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.312224276IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.46E-10226276No hitNo description
PfamPF001703.2E-13226279IPR004827Basic-leucine zipper domain
PROSITE patternPS000360229244IPR004827Basic-leucine zipper domain
PfamPF124984.3E-26293422IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MSGIFYVDDF SDLLWQPPVH ALAMSRSASE WELLEEFFAH ASASARENNS PFVVQSPTSR  60
KPLNSDDGVV EIENPEIPAP TPLPLAPLSR DRPPRPSHRA ILSQVDAEDY PAFLKSQLDL  120
TYAAAAKSRE SSVKPEGASS LPEDQIVASK NFQSGSHVSG NGDCILKAQS EADGGSLCFP  180
ALPPTQKKQD VPARQTTSQS SREDSDDDDL DGDTETNDHM DPADEKRVRR MQSNRESARR  240
SRRRKQAQLS ELEAEVGQLR DECTSLLTRL TDINKKCDEA SVENRILNAN IETLRTKVKM  300
AEDQVKRATG LNPMLFARSN IPSVGMQLAA GQTDASASVD VQMPPNHRHF YHQSVPNIPS  360
STPSLQGRNN SYPNNNLNSH ATNPQGDNGT SNIGGVPFIR PLTVSGRHML ETPPLQHVQK  420
QTGPTVSHA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238245RRSRRRKQ
2240245SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G202200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021607372.10.0light-inducible protein CPRF2-like
TrEMBLA0A2C9WQ440.0A0A2C9WQ44_MANES; Uncharacterized protein
STRINGcassava4.1_008866m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.19e-42basic leucine zipper 25