PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G104200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 321aa    MW: 35814.4 Da    PI: 5.2464
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G104200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.35.8e-184392255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  Manes.01G104200.1.p 43 RSKHSETEQRRRSKINERFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 92
                         899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.4E-2340115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.2954191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-2042113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.10E-174396No hitNo description
PfamPF000102.4E-154392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.8E-144797IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MVKSARSHLE EEDEPDDYDS SSYRGDVSKM DGKSSGQKVN THRSKHSETE QRRRSKINER  60
FQVLRDLIPQ NDQKRDKASF LLEVIEYIQF LQEKLQMYEG PYQGWSQEPT KLTPWKNHNL  120
PVEGAMDHSQ ASNNGSAHKT TAMLTNLNNL IEPHLGTTAV PFNVQVQSNM FAAVGREDVI  180
AQPVQESVSD AENMAYPHQS QLWQGQPCAT ECGTLNNTSN GQDEPMIETG SVGLSNTYSQ  240
GILYTLTEAL RSSGVDLTQT NISVQIDVGK QGNRGAPFVA SSSKDEEILN FHNQVMEQTG  300
VRGRMEDSDQ AHKRPRTEKS *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G104200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021633926.10.0transcription factor BIM2-like isoform X1
TrEMBLA0A2C9WKZ50.0A0A2C9WKZ5_MANES; Uncharacterized protein
STRINGcassava4.1_011969m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.16e-60BES1-interacting Myc-like protein 2