PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.01G103800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 323aa MW: 36542.8 Da PI: 7.2834 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.5 | 5.4e-27 | 229 | 282 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+ WtpeLH+rF +++ LGG+e+AtPk+i++ m+v+gLt ++vkSHLQkYR+ Manes.01G103800.1.p 229 NRRSWTPELHARFAVVLHLLGGPEVATPKQIRDQMQVEGLTTNQVKSHLQKYRM 282 799**************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.379 | 225 | 286 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.23E-15 | 226 | 285 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.3E-22 | 227 | 284 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-22 | 228 | 282 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.4E-9 | 230 | 281 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MLSQLFLFCQ EQKEMKGVQG MLHLWQKILH WSHLDNSHCT YIGAKTKCVF ADEALRCLYA 60 FGLGLKLSYV PQSLPNAIKD LSIGESNEVK LLLLNDYLLK CQEEMTFTGV FKQELPQSRS 120 LLTDAIEALK EEMRKTRIAM GLESESSPED VLATKKRGSD EQQGLDLNNP CSDQWSNTPT 180 HHHHNKEQIC GSLSIDPSPS MEVNLTVGEN QEPVSYKMKP LTQCIWKNNR RSWTPELHAR 240 FAVVLHLLGG PEVATPKQIR DQMQVEGLTT NQVKSHLQKY RMNWRSSPEG AADPQRRSKL 300 FCRNLARPPS AAADAINMEE IN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.01G103800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021616781.1 | 0.0 | transcription factor HHO5-like isoform X3 | ||||
Refseq | XP_021616789.1 | 0.0 | transcription factor HHO5-like isoform X3 | ||||
TrEMBL | A0A2C9WJL4 | 0.0 | A0A2C9WJL4_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_027101m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14866 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.1 | 2e-26 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.01G103800.1.p |