PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G035100.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 355aa    MW: 39956.3 Da    PI: 9.2241
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G035100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.8e-312074155
              G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         kprl+WtpeLH+rFvea++qLGG++kAtPk+++++m+v+ Ltl+h+kSHLQkYRl
  Manes.01G035100.2.p 20 KPRLKWTPELHHRFVEALRQLGGEDKATPKSLMRVMGVPRLTLYHLKSHLQKYRL 74
                         79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.3921777IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-301877IPR009057Homeodomain-like
SuperFamilySSF466891.97E-161977IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-232075IPR006447Myb domain, plants
PfamPF002498.2E-82273IPR001005SANT/Myb domain
PfamPF143791.6E-21130177IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGFQNLQNQN MNLVLSTDPK PRLKWTPELH HRFVEALRQL GGEDKATPKS LMRVMGVPRL  60
TLYHLKSHLQ KYRLAKRHPT ELQSEFQSQS QSQSQGSIEN KKDYKEIQIS NPALRGGISE  120
GNQSPLNESF QIAQVLQMQM EVQRKIHEQI EVQRHLQVRI EAQGKYLQSV LKKAQETLSG  180
YSSSSLGIEL AKAELSRLVS MVNNECRSPS ISELTEIEGS SLKGTERKKM RGTVCSMESS  240
LTSSESSGRK EDKQLTNEFG NTHKSNPASI ELPLMDIHPR EKPWNSGTSD QVKKRTCCTI  300
SDGICVEQPP VKRSKIGDRL RIFDLNSHCQ NEFESGSKTI DLNCKGIEQV NGQL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-182076157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-182076157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-182076157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-182076157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-182076258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G035100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021615476.10.0myb family transcription factor PHL8-like isoform X3
SwissprotF4I2742e-84PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A2C9WHV50.0A0A2C9WHV5_MANES; Uncharacterized protein
STRINGcassava4.1_010425m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-80G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]