PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000908053 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | BES1 | ||||||||
Protein Properties | Length: 172aa MW: 18347.4 Da PI: 10.0169 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 114.9 | 1.2e-35 | 10 | 106 | 6 | 103 |
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101 +++ E+E++k RER+RRai++ki+ GLR++G+y+l r D+neVl+ L++eAGw+ve+DGttyr p+ + g+ + ++p + + +++ss MDP0000908053 10 GRSESEKEKTKMRERQRRAITTKIFHGLRKHGGYRLSPRGDINEVLRHLATEAGWLVEPDGTTYRPPNAPN-CCPTCGTPKATTPVATATPTPSSS 104 45678999*********************************************************776666.444444544444444444333333 PP DUF822 102 al 103 + MDP0000908053 105 VV 106 22 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.7E-33 | 11 | 133 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
CDD | cd00350 | 0.00226 | 70 | 89 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MAGTSGIGSG RSESEKEKTK MRERQRRAIT TKIFHGLRKH GGYRLSPRGD INEVLRHLAT 60 EAGWLVEPDG TTYRPPNAPN CCPTCGTPKA TTPVATATPT PSSSVVIGGG DCSTTTSPSR 120 FPAFNTTTNT SSMSIYSPLY RYEGGHPQPQ LQEARASNNT TPVASPPHHR P* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008383467.1 | 1e-123 | BES1/BZR1 homolog protein 2-like | ||||
TrEMBL | A0A498IXA3 | 1e-121 | A0A498IXA3_MALDO; Uncharacterized protein | ||||
STRING | XP_008383467.1 | 1e-122 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13979 | 16 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 5e-21 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000908053 |