PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000879912

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

VOZ

Protein Properties

Length: 603aa MW: 66882.1 Da PI: 6.6353

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000879912	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438.5	8.6e-135	326	542	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpaqg++w+ dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna elf MDP0000879912 326 PPPSAFLGPKCALWDCPRPAQGMDWWLDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKSVGIPECEGAATAKSPWNARELF 421 89******************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dls+lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqps++fewhlyeyein++da+alyrlelklvd+ MDP0000879912 422 DLSVLEGEVIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPSNHFEWHLYEYEINKCDACALYRLELKLVDG 517 ******************************************************************************************** PP VOZ 193 kksakgkvskdsladlqkklgrlta 217 kk++kgk+++ds+adlqk++grl+a MDP0000879912 518 KKNSKGKLTNDSVADLQKQMGRLSA 542 *********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence Send to blast
MVLMSFATAH ASHSFNPFTS VHAGRTCAFT FHSAPARHGE SESERKEKPP LLPSTELSRF 60 HTSRRCHPKP SRPPDPNSLS VGLEGGGCVM KGSKSNCKSA SHNLFKDKAK NRVDDLQGMF 120 MDLQFARKES RSIDAALLEE QVHQMLREWK AELNEPSPAS SLQQQGGSLG SFSSDICRLL 180 QLCEEEDDAT SPLAAPKPEP NDQNLQVGES LVFHELCALF FRFEMKSESV VYEHSLVVAN 240 TIYQGFSVNQ GQQEHAMPLA DQSKSSPSGV RNVAVNNLEG ANQLDYHQFE LHQDFEQSFY 300 PCFNATALSG EDTLPQVSTY LPSIFPPPSA FLGPKCALWD CPRPAQGMDW WLDYCSSFHA 360 ALALNEGPPG MGPVLRPGGI GLKDGLLFAA LSAKAQGKSV GIPECEGAAT AKSPWNAREL 420 FDLSVLEGEV IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYGGLKRSY 480 YMDPQPSNHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLTNDSV ADLQKQMGRL 540 SAEFPIDNKR IVKGRAKVNA KVGVGNVYHS PNRGTTTNAT FDYGSGAPYD YLLDDVNGYY 600 IT*

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence Send to blast

MVLMSFATAH ASHSFNPFTS VHAGRTCAFT FHSAPARHGE SESERKEKPP LLPSTELSRF  60
HTSRRCHPKP SRPPDPNSLS VGLEGGGCVM KGSKSNCKSA SHNLFKDKAK NRVDDLQGMF  120
MDLQFARKES RSIDAALLEE QVHQMLREWK AELNEPSPAS SLQQQGGSLG SFSSDICRLL  180
QLCEEEDDAT SPLAAPKPEP NDQNLQVGES LVFHELCALF FRFEMKSESV VYEHSLVVAN  240
TIYQGFSVNQ GQQEHAMPLA DQSKSSPSGV RNVAVNNLEG ANQLDYHQFE LHQDFEQSFY  300
PCFNATALSG EDTLPQVSTY LPSIFPPPSA FLGPKCALWD CPRPAQGMDW WLDYCSSFHA  360
ALALNEGPPG MGPVLRPGGI GLKDGLLFAA LSAKAQGKSV GIPECEGAAT AKSPWNAREL  420
FDLSVLEGEV IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM NEYGGLKRSY  480
YMDPQPSNHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLTNDSV ADLQKQMGRL  540
SAEFPIDNKR IVKGRAKVNA KVGVGNVYHS PNRGTTTNAT FDYGSGAPYD YLLDDVNGYY  600
IT*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.950	0.0	bud\| fruit\| leaf

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB531023	0.0	AB531023.1 Malus x domestica MdVOZ1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008383671.1	0.0	transcription factor VOZ1
Refseq	XP_008383672.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A498ISJ3	0.0	A0A498ISJ3_MALDO; Uncharacterized protein
STRING	XP_008383671.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	MDP0000879912

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]