PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000647877

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

BES1

Protein Properties

Length: 538aa MW: 61292.4 Da PI: 9.9984

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000647877	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	158.3	5.4e-49	398	486	1	87
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssas 87 ++++r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gnyklpk++DnneVlkALc eAGw+ve DGttyrk + e e +g+ + MDP0000647877 398 TSGTRMPTWKERENNKRRERRRRAIAAKIFXGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVELDGTTYRKXCASVraXEXELVGNVDH 486 5899********************************************************************99885555566665544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	7.1E-46	399	484	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence Send to blast
MNHYFSLSQR RAEFYNQNLE NDLHEQSHYQ VTNAAKPQQN HSKTSTPKHP YTHRPCIPSE 60 PSTSLNPNPL FIFLTTHKPF SRFSIAYRFF TSSHQTENQT RPRKPLDLLF KEAVELSPKP 120 ENSDSEXETK DNQLKKSLRD LEEEVRSLRA ENKAKKREPN SDSEGEVSLX AVFTNKKPAD 180 GXSRKRMAVT RERSNVLKDL SQDMEVXASH LFKEGYFKDA NFLFVNGDRL DISCFNNSYG 240 RSFIRFAVES FARDNQVIAK FCKSFCSLIF CRARRWRDVG PEGGAAGVGS REXPATHDAC 300 IAMGMEQTPG PRAVRHIRSN SSILXKIQVP RRXQLTPILP FNAAVSPXLL PSASEDSILT 360 LLLSSQLKIS LRGGVFSVPA SNEGLLDRRR RAARSEMTSG TRMPTWKERE NNKRRERRRR 420 AIAAKIFXGL RMYGNYKLPK HCDNNEVLKA LCDEAGWTVE LDGTTYRKXC ASVRAXEXEL 480 VGNVDHLQHE VAHVSXVANL RRVQRFLPGK CPESXXADKW EVFAXMSWCY RHTLAEG*

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence Send to blast

MNHYFSLSQR RAEFYNQNLE NDLHEQSHYQ VTNAAKPQQN HSKTSTPKHP YTHRPCIPSE  60
PSTSLNPNPL FIFLTTHKPF SRFSIAYRFF TSSHQTENQT RPRKPLDLLF KEAVELSPKP  120
ENSDSEXETK DNQLKKSLRD LEEEVRSLRA ENKAKKREPN SDSEGEVSLX AVFTNKKPAD  180
GXSRKRMAVT RERSNVLKDL SQDMEVXASH LFKEGYFKDA NFLFVNGDRL DISCFNNSYG  240
RSFIRFAVES FARDNQVIAK FCKSFCSLIF CRARRWRDVG PEGGAAGVGS REXPATHDAC  300
IAMGMEQTPG PRAVRHIRSN SSILXKIQVP RRXQLTPILP FNAAVSPXLL PSASEDSILT  360
LLLSSQLKIS LRGGVFSVPA SNEGLLDRRR RAARSEMTSG TRMPTWKERE NNKRRERRRR  420
AIAAKIFXGL RMYGNYKLPK HCDNNEVLKA LCDEAGWTVE LDGTTYRKXC ASVRAXEXEL  480
VGNVDHLQHE VAHVSXVANL RRVQRFLPGK CPESXXADKW EVFAXMSWCY RHTLAEG*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	8e-20	402	470	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	8e-20	402	470	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	8e-20	402	470	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	8e-20	402	470	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.21696	2e-91	bud\| leaf\| stem

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-26	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	MDP0000647877