PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000617021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 949aa    MW: 105804 Da    PI: 6.802
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000617021genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.41e-30652705255
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     rlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  MDP0000617021 652 SRLRWTPDLHLCFIRAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 705
                    69***************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF011032.8E-25193520IPR000184Bacterial surface antigen (D15)
PROSITE profilePS5129412.73648708IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-28648706IPR009057Homeodomain-like
SuperFamilySSF466893.76E-14649707IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-22652707IPR006447Myb domain, plants
PfamPF002498.7E-9653704IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005739Cellular Componentmitochondrion
GO:0009536Cellular Componentplastid
GO:0019867Cellular Componentouter membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 949 aa     Download sequence    Send to blast
MAKSDSETQN PKDDRDEEPP SNVDGTVDGD PEPDEMDDEI DEEEDEDDDE EPPLPRKPLS  60
QEARLRAEKS KLENLVQRMS TERVDLRVHD VLIKGNTKTK EHLIEAELAG IKKATTMQEL  120
LEAAAIANAK LQQLEIFDAV RITLDSGPPE LPGTTNVIVE VVETKSPISG XIGAYTKPAA  180
RSWTAEGTLK FKNLLGYGDL WDSSLAYGPN QTSELSAGLF LPRFKGFVTP MTARAFLLSQ  240
DWLEFSSYKE RMMGLSLGLI SSKHHDLAYN LGWRTLADPS QLASRSIRRQ LGHELLSSIK  300
YTFKIDRRNS PLRPTRGYSF VSTSHIGGIA PDHRSTRFLR QEFDLRYAVP LGFYHAALNF  360
GISAGVIFPW GSGFLNKPSS LPERFFLGGD FSPVCTVGGP TTVWGFKTRG LGPTEPRRHV  420
GDNSNEENSE SPGRDSVGGD LAVSAFADIS FDLPLRWLKQ HGVHGHIFAG AGNLAKLTEN  480
EFRNFSAPKF LQSFRSSVGA GIVVPTKFFR LEEAWCFDDA HKKKNNMRFP VLEHINTAIK  540
TVEKILKLEK KSEKQTFKYL ISWDTLDAVS DINRLGMKSE STSIEEVSKS SPSTSKKEYD  600
HEDDEGEEDE VDEEGLQLRN NGGSSSNSTI EENHEKKGAS GSVRQYVRSK TSRLRWTPDL  660
HLCFIRAVER LGGQERATPK LVLQLMNVKG LSIAHVKSHL QMYRSKKTED HNQVVTDQAG  720
FFMEGGDNQL YNLTQLSMLQ SFNRWPSSRL RYGANDHSSW RGRHHQIYSP YSSSRTTALL  780
DHNTRNIGLY GSVAERILGS NNTNIMSTSA NQLYTNLPSP SHGQRNQIPW DELCQTMIHR  840
PCQDHHSWTA VIRDHQGQNM LKRKGLDTDN CDLDLNLSLK VPPKHDHGFG KGLQCGDDNH  900
QKLLMGCSLS LTLSSSSSSK LGVKKLEGTG YGDGKHGKNM ASTLDLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-17652707257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-17652707257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-17652707257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-17652707257Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.258671e-156fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008369284.20.0sorting and assembly machinery component 50 homolog
TrEMBLA0A498JM490.0A0A498JM49_MALDO; Uncharacterized protein
STRINGXP_008369284.10.0(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-44G2-like family protein