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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MDP0000607785 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
GRAS |
| Protein Properties |
Length: 607aa MW: 67909.8 Da PI: 7.0462 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000607785 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 384.9 | 9.6e-118 | 244 | 606 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
+++Ll cA+a+s++dl a++ ++ l ++s +g+pmqRl ay++e+L+a+l rs+s +ykal+++ + ss+ ++++++++ ++P+ kf++
MDP0000607785 244 KDVLLFCAHAISEDDLYTATSWMEVLGXMVSVSGEPMQRLGAYMLEGLRAKLERSGSLIYKALKCEVPT---SSQLMSYMSVLYXICPYWKFAYTS 336
6899****************************************************************9...999999****************** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
aN I ea+e+e r+HiiDf+i qG QW+a p+gpp +RiTgv++ +s + l+ +gerL+k+A+++ vpfefn+ +a+ +++el
MDP0000607785 337 ANVVIREALENEPRIHIIDFQIAQGSQWLA-------GPGGPPCIRITGVDDTQSAhaRGGGLHIVGERLSKLAASCYVPFEFNA-AARCGSQVEL 424
****************************75.......59*************9988889999***********************.9********* PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
++Lr++pgEa+aVn + lh+++desvs+e++rd++L+lvkslsPkv+++veqe+++n+++F+ rf e ++yy+a+f+s+++ pr++++ri+ E+
MDP0000607785 425 HNLRIQPGEAIAVNXPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFFSRFREMVDYYTAMFESIDVARPRDDKQRINAEA 520
************************************************************************************************ PP
GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++++r+ivn++acegaer+erhe ++kWr+rl++ GF+p+pls k++ ++ ll++++++ +r++e +g+l+lgWk+r++v+ SaWr
MDP0000607785 521 HCVARDIVNMIACEGAERVERHEPFGKWRSRLMMDGFTPYPLSPKVTXAIRILLKEFNEN-FRIQEADGALYLGWKQRAMVTSSAWR 606
**********************************************************55.*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 607 aa
Download sequence Send
to blast |
MKDPRWNVNI SIQFNSVLKR GWSLDPRNTL DPKNGDLIPL PTSTRTRQSK GMVGVVGKEK 60
VLHPLPYKLQ EMKTSQQHRG VASIHHKLYH PPVQQIDAYG YQILENSVFP DTGSQGNNVS 120
FQTGKDDEEQ FFTLESSPAT AFVXCDSPSA VSGLSNKSPF SPQGSHSCLS DQHHSSGNNY 180
GSPTSGCSVV EDDNEFKYRL REVEVSLLGP DSDIVDSHFC CHKSGMARWS QSQIATMIPK 240
LNLKDVLLFC AHAISEDDLY TATSWMEVLG XMVSVSGEPM QRLGAYMLEG LRAKLERSGS 300
LIYKALKCEV PTSSQLMSYM SVLYXICPYW KFAYTSANVV IREALENEPR IHIIDFQIAQ 360
GSQWLAGPGG PPCIRITGVD DTQSAHARGG GLHIVGERLS KLAASCYVPF EFNAAARCGS 420
QVELHNLRIQ PGEAIAVNXP YVLHHMPDES VSTENHRDRL LRLVKSLSPK VMTLVEQESN 480
TNTSPFFSRF REMVDYYTAM FESIDVARPR DDKQRINAEA HCVARDIVNM IACEGAERVE 540
RHEPFGKWRS RLMMDGFTPY PLSPKVTXAI RILLKEFNEN FRIQEADGAL YLGWKQRAMV 600
TSSAWR*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: During development, higher expression levels are detected in young rosette leaves, senescing leaves and petals and sepals at flower stage 15. {ECO:0000269|PubMed:16680434}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, hypocotyls, cotyledons, shoot apex, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:16680434, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
