PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000596661
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TALE
Protein Properties Length: 808aa    MW: 88587.1 Da    PI: 6.8424
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000596661genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-096246611954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  MDP0000596661 624 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 661
                    564459******************************87 PP

2BELL102.43.2e-33473541472
           BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    e q+kkakLl ++eeV +rYkqy++q+q+v++sFe v gl sa+pY+ +Al+a+SrhFrcL + i++q+
  MDP0000596661 473 EYQQKKAKLLYMQEEVSRRYKQYHQQMQMVVASFESVXGLSSATPYICMALNAVSRHFRCLTNSIKDQL 541
                    789***************************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.4E-37372539IPR006563POX domain
PfamPF075265.4E-39377537IPR006563POX domain
PROSITE profilePS5007111.888602665IPR001356Homeobox domain
CDDcd000866.79E-11605666No hitNo description
SMARTSM003891.2E-7605669IPR001356Homeobox domain
SuperFamilySSF466891.45E-16607672IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.2E-27608669IPR009057Homeodomain-like
PfamPF059203.8E-18622661IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 808 aa     Download sequence    Send to blast
MEMSGFRHES HVAQQSRRDK LRVNQTSXPP HHLDNLANNS GKLPLHPGLN PDIVQVRNVR  60
NANLLYDPTM FSSEMLDFSI NANAPLSAHR ITLACHDQDL GAAQPAGGES QNFGNWRSTL  120
NPPQSIDWVN NYTSGYQDVV QSSLANSSAD QISSHHVAQK HLGGGTMHFS SPSIKFVNTL  180
QDVVTSASQG TQQDQLEMAS IVHQRIMENE LVRVPSYGNQ SNTLRFNSAS NSWMDRQPIE  240
NRHNWSSGGG GGLEFSTANS VDEEMRTGMS SDXNQQGLSL SLSSNPPSNK LPVAQLIGSQ  300
DLHASTDDDD DDDHQALKDL QNSKMGKSSG GYLCSITKPS IISKTCGKSL KDIVGNSSTS  360
AYRSTGPLGP FTGYATILKS SKFLKPAQQX LDEFCWVSDS KILKTCEASE RMSGDVSASA  420
SVSISIEAGN ATETEVVAKR NNSGASSSTF YGSTEISSDG GAASISSESF WPEYQQKKAK  480
LLYMQEEVSR RYKQYHQQMQ MVVASFESVX GLSSATPYIC MALNAVSRHF RCLTNSIKDQ  540
LKHTRKALGE EYMSSSVTAA GTAECSSKGE KNFAKLKYMG LGFQKHNKSG GGSLVGFSEP  600
QQHVWRPQRG LPERSVAILR TWLFEHFLHP YPTDTDKHML ATQTGLSRNQ VSNWFINARV  660
RVWKPMVEEI HMLETRGGSF EAGQDPIIKD GNSANEGTSS RPNNDHQLSM NVMPNRQLEC  720
SVDAEQRNQE MKRSRLECQV PSNMDGGLMG FVQDQRGGFE AGGLGAVSLT LGLRHGVESA  780
QQQQQLQQQE DQLRXQLGGQ MIRDYAG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A5e-15611668158Homeobox protein Meis1
4xrs_B5e-15611668158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009367039.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A498KB130.0A0A498KB13_MALDO; Uncharacterized protein
STRINGXP_009367039.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.18e-85BEL1-like homeodomain 8