PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000565880
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family EIL
Protein Properties Length: 605aa    MW: 67547.3 Da    PI: 5.6281
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000565880genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3434.11.3e-132373851328
                    XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                    e+l+ rmwkd+++lkrl+er+k   e+++a ++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWk
  MDP0000565880  37 EDLEMRMWKDRIKLKRLRERQKL--EAQQA-AEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNVRAWWK 129
                    89*************99999885..55665.99*************************************************************** PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--. CS
           EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgt 192
                    ekv+fd+ngpaai+ky+a++l++s+++++  ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl++ q+ 
  MDP0000565880 130 EKVKFDKNGPAAIAKYEAECLAMSDADNN--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVKLGLAHGQS- 222
                    ************************99998..68999999*******************************************************9. PP

                    -----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXXXXX CS
           EIN3 193 ppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtlsceq 280
                    ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++         ++  ++++  +s+++
  MDP0000565880 223 PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRKHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgiiempQSGCGEKQAAASSNS 318
                    9**********************************************************************44456776554445999******** PP

                    XXXXXXXXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXXXXXX..... CS
           EIN3 281 kedvegkkeskikhvqavktta.....................gfpvvrkrkkkpsesakvsskevsrt 328
                    ++dv+g+++   + +++++  +                     + + + ++k +++++a v ++ v ++
  MDP0000565880 319 DYDVDGTDDGLGSVSSSKDD-MrnqvtdveplsklrnxsrnnvQXKEQGEKK-PRTKRARVRASPVEQL 385
                    *****666655442222222.2235666778888887776644444444444.4444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-12637284No hitNo description
Gene3DG3DSA:1.10.3180.103.1E-72158292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.22E-62165287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MGDVGEIGPD ISSDIEEDLR CXNIAEKDVS DEEIESEDLE MRMWKDRIKL KRLRERQKLE  60
AQQAAEKQKP KQTSDQARRK KMSRAQDGIL KYMLKLMEVC KARGFVYGII PEKGKPVSGA  120
SDNVRAWWKE KVKFDKNGPA AIAKYEAECL AMSDADNNRN GNSQSILQDL QDATLGSLLS  180
SLMQHCDPPQ RKYPLEKGVP PPWWPTGNED WWVKLGLAHG QSPPYKKPHD LKKMWKVGVL  240
TAVIKHMSPD IAKIRKHVRQ SKCLQDKMTA KESAIWLGVL SREESLIRQP SSDNGTSGII  300
EMPQSGCGEK QAAASSNSDY DVDGTDDGLG SVSSSKDDMR NQVTDVEPLS KLRNXSRNNV  360
QXKEQGEKKP RTKRARVRAS PVEQLPAPSP NEHLHVRGAL PDINHTDVQM IGFQVHENQQ  420
ENGGITTLRP LENDLDVQAQ IPAPEFNYYP GVPSENVIMT QGMHVGGTPL LYHGVQDADM  480
HHGDTFNQHH GDTFNLXNPX AQYPPSQDQQ LPQIVMNKPQ XIPXXGIHVP VHRNGSEIAG  540
XDXNFVQDTF QSEQDRTANA NFGSPIDSLS LDYGLFNSPF NFGIDSTGSL DDLELEEMME  600
YFAA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-751642959140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.1890.0root
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0310650.0EF031065.1 Prunus persica EIL1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008366164.20.0LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A498KBW10.0A0A498KBW1_MALDO; Uncharacterized protein
STRINGXP_008366164.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]