PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000551969
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 423aa    MW: 46595 Da    PI: 4.3928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000551969genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194796255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  MDP0000551969 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                   789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.25E-3246103No hitNo description
Gene3DG3DSA:3.30.730.102.3E-2747103IPR001471AP2/ERF domain
PfamPF008471.1E-134796IPR001471AP2/ERF domain
PROSITE profilePS5103219.55947104IPR001471AP2/ERF domain
SMARTSM003802.1E-3447111IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-1947104IPR016177DNA-binding domain
PRINTSPR003676.3E-84859IPR001471AP2/ERF domain
PRINTSPR003676.3E-87086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MARKRKVSEG VEDNNATSSE GTMGWDEMVN EASAVAELGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSHSP SSTPALPSKI  120
TNLLLQRLKA RNNANSCSPP SSAPLPIINH QHDHNLHEQA AKTEFSETYT DFLNDPEDYY  180
ITSSNNHDII TDHISASSID YMTSSLESCL TNKETDHIEY GNLSELVQQT YSCGDANFVA  240
EGSEEDVDPE QEQEEEMNGD QVGVIDFQFV DDIGASNSNC YSPSPFEIAE EIEEPVLEAE  300
SYTDEPSMLR AAMKRMKYER KFSASLYAFN GIPECLKLRI GSVNGNGKGR GVSECLSNLQ  360
RACSNKKEEE VVVAVAAAGE HQRNDSKQEE QGSSMDVSLS SDGELSLWSS LDLPPICXLS  420
TN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008341764.20.0ethylene-responsive transcription factor ERN1-like
TrEMBLA0A498HCV00.0A0A498HCV0_MALDO; Uncharacterized protein
STRINGXP_008341764.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23related to AP2 11