PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000529388 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | BES1 | ||||||||
Protein Properties | Length: 125aa MW: 13721.9 Da PI: 10.2952 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 90.1 | 5.4e-28 | 33 | 96 | 2 | 65 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedD 65 +sg ++++ E+E++k RER+RRai++ki+ GLR++ +y+l r D+neVl L++eAGw+ve++ MDP0000529388 33 TSGSRRSESEKEKTKMRERQRRAITTKIFHGLRKHXGYRLSSRGDINEVLXHLATEAGWLVEPG 96 68889999******************************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.3E-23 | 35 | 96 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MSAGLAMSQS DDGDNKEQKK KWRSGEREEI AGTSGSRRSE SEKEKTKMRE RQRRAITTKI 60 FHGLRKHXGY RLSSRGDINE VLXHLATEAG WLVEPGAPNC CPACGTPKTT TPVATTTPTP 120 SRAW* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009344419.1 | 7e-44 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like | ||||
Swissprot | O80831 | 6e-17 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A498HK27 | 2e-46 | A0A498HK27_MALDO; Uncharacterized protein | ||||
STRING | XP_008389172.1 | 6e-47 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13979 | 16 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 6e-11 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000529388 |
Publications ? help Back to Top | |||
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