PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000513140
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 624aa    MW: 69249.3 Da    PI: 4.6557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000513140genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-0791133752
            AP2   7 rwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkk 52 
                    r+ + +++W A++      g ++   +lg+f t+e+Aa+a++  + +
  MDP0000513140  91 RRISGKKKWQARLGR----GkRHNGLYLGTFETEEQAARAYDIGAIR 133
                    67777899****666....54459******************87766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.00132073IPR001471AP2/ERF domain
PROSITE profilePS510328.5184067IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-74068IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-64068IPR016177DNA-binding domain
PROSITE profilePS5103214.14486144IPR001471AP2/ERF domain
CDDcd000181.48E-1491146No hitNo description
SMARTSM003806.3E-1391150IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1095146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-1296145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    Send to blast
MAKKLDVIWE SGHQENYLHQ IRHGERQLTC DCEENNKCGF DKEEDAARAH DLAALKLWGE  60
CAKLNFPXEX YKKDLEEMQT MTKQDYFLXI RRISGKKKWQ ARLGRGKRHN GLYLGTFETE  120
EQAARAYDIG AIRTKGTDAA TNFDVSENDV NSILQSEKLP IGEGASKSLK FASSVDDFIQ  180
SRRKTNKKTP FLQPYEDHRL GILNRISTQP SSSFQQTTLQ TLPIYPNDSN CSQYVDPFLQ  240
DFQNTDNIQN NQLLQYYSVS PRYQVQCVPA GYQNANFETN RIFSHWDGNT YGGGNNSVGS  300
AINIGPVIPS QNHELNQFQY YNNDAYGQKL SQNPNSSYLL QNSHVSAYPQ TISPTFLPGL  360
NNLHTCSSYI GECSSSQAEV SLDTILGETD ESLGSDIVSE VVPVADLEVH VNPIERNSIX  420
VLPEDRENGS TGYQNANFET NPIFSHWDGN TDGRGDNSVG SAINIGPVIP SQNHELNXFQ  480
YYNNDAYGQK LSQNPNSSYL LQNSHVSAYP QTINSTFLPG LNNLHAXSSY XGECSSSQAE  540
MSLDTILGET DGSLGSDIVS EVVPVADLEV HVNPIERNSV LPGDRENGSV VEVSGVSKSG  600
HVLDTSSWKD LLLMSLNDPD CKL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498I3Y90.0A0A498I3Y9_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1650648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.13e-40AP2 family protein