PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000490180 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | EIL | ||||||||
Protein Properties | Length: 607aa MW: 67703.4 Da PI: 6.2415 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 434.4 | 1.1e-132 | 37 | 377 | 1 | 315 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 e+l++rmwkd+++lkrlker+k e+++a ++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWk MDP0000490180 37 EDLERRMWKDRIKLKRLKERQKL--EAQQA-AEKQKPKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWK 129 89*****************9996..45665.99*************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--. CS EIN3 97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgt 192 ekv+fd+ngpaai+k++a++l++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl++ q MDP0000490180 130 EKVKFDKNGPAAIAKHEAECLAMSDADNN--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVKLGLAHGQI- 222 ************************99998..68999999****************************************************9999. PP -----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXXXXX CS EIN3 193 ppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtlsceq 280 ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ ++ +++++ +s+++ MDP0000490180 223 PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgitempQSGHGEKQGAASSNS 318 9**********************************************************************4445677776667799999****** PP XXXXXXXXXXX.X.XXXXXXXXX.......................XXXXXXXXXXXXX CS EIN3 281 kedvegkkeskik.hvqavktta.......................gfpvvrkrkkkps 315 ++dv+g+++ + +++++++++ + + +rk+ ++ MDP0000490180 319 DYDVDGTDDGVGSvSSSKDDRRNqvmdvdpssnlhnnarnnvqdkeQGEKKPRRKRARV 377 *****555544331233333333677788888888776555544333333333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 7.8E-127 | 37 | 284 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.2E-72 | 158 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.96E-62 | 165 | 287 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 607 aa Download sequence Send to blast |
MGDVGEIGPD ISSDIEEDLR CDNIAEKDVS DEEIEAEDLE RRMWKDRIKL KRLKERQKLE 60 AQQAAEKQKP KQTTDQARRK KMSRAQDGIL KYMLKLMEVC KARGFVYGII PEKGKPVSGA 120 SDNIRAWWKE KVKFDKNGPA AIAKHEAECL AMSDADNNRN GNSQSILQDL QDATLGSLLS 180 SLMQHCDPPQ RKYPLEKGVP PPWWPTGNED WWVKLGLAHG QIPPYKKPHD LKKMWKVGVL 240 TAVIKHMSPD IAKIRRHVRQ SKCLQDKMTA KESAIWLGVL SREESLIRQP SSDNGTSGIT 300 EMPQSGHGEK QGAASSNSDY DVDGTDDGVG SVSSSKDDRR NQVMDVDPSS NLHNNARNNV 360 QDKEQGEKKP RRKRARVRAS PVXQRPAPSH NEXLHVPTRG ALPDINHTDV QMIGLQVHEN 420 QQENGXITTL RPLENDLDVQ AQRPAPEFNY PGVPSGNVIT TQGMHVGGTP LLYHGVRDAD 480 MHHGDTFNQH HGDTFNLYNP STQYPPSHDR QPPQIVMNEP QIIPADGVHV PVHRNGSEIA 540 GGDLPNFVQD TFQSEQDRTI NANFGSPIDS LSLDYGXFNS PFNFGIDGTG SLDDLELXEM 600 MEYFAA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 4e-75 | 164 | 295 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.189 | 0.0 | root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF031065 | 0.0 | EF031065.1 Prunus persica EIL1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017191198.2 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_017191199.2 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_028943719.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_028943720.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A498IUZ9 | 0.0 | A0A498IUZ9_MALDO; Uncharacterized protein | ||||
STRING | XP_008384462.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-170 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000490180 |
Publications ? help Back to Top | |||
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