PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000450214 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | G2-like | ||||||||
Protein Properties | Length: 321aa MW: 35604.2 Da PI: 10.7407 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.4 | 4.3e-10 | 22 | 47 | 2 | 27 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 p lrWtp+LH++F++a+e+LGG+++ MDP0000450214 22 PSLRWTPKLHRCFLQAIERLGGHKRN 47 679********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-8 | 18 | 48 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MTSSSCSARN GAVGQYVRSK VPSLRWTPKL HRCFLQAIER LGGHKRNKLE ELKNMVYLRG 60 TLHISKLENA VNAGEERNDS KSGHKSNQME LQLVHALELH PLLXMEQLGE ARVSLSGAFR 120 IFVTYGELAQ PSKEIKGRSF KVPFKEKIKP FLKGDTLFKT KVVLQEIESK SLCFVFKGNP 180 RDLPSTGLFS AKPTIVTTTN VKHAIPKQKP YEARIWEREQ DLGRGVKHFL KTQKTLIWKW 240 QGFPPISKPL QVARRGLIIT CPTSLARQDL PDKPASKAGA RQKPSTGANL SGSCVLVGQE 300 ASPTEIPATN IVLARPVGFC * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 39 | 47 | RLGGHKRNK |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.30219 | 1e-48 | bud| leaf |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 2e-10 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000450214 |