PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000444494
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 93aa    MW: 10297.4 Da    PI: 6.5439
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000444494genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.33.3e-0710501154
            AP2 11 krgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
                    +g+Wv+eIr+       +    +lg+f t e  a a++    +l+
  MDP0000444494 10 DKGKWVSEIRVsX-----TqDXLWLGSFSTTEAXAXARDVXYYCLR 50
                   57*********44.....35**********8888999988888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.166160IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-11653IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-71053IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MXARRRTLPD KGKWVSEIRV SXTQDXLWLG SFSTTEAXAX ARDVXYYCLR RPSTLELPSC  60
VRDDISPKSV QEAASDDXMA VNAQXIANXS PP*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018498313.13e-36PREDICTED: ethylene-responsive transcription factor ERF019-like
SwissprotQ9C9I81e-22ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A498JGG81e-34A0A498JGG8_MALDO; Uncharacterized protein
STRINGXP_009335464.11e-35(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-25ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]