PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000410792
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 316aa    MW: 34047.5 Da    PI: 8.5962
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000410792genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222182.1e-6751461147
         DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                    g+sgr ptwkErEnnkrRERrRRaiaak+y+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp   +e+ag  +++s +ss+q+
  MDP0000410792   5 GSSGRLPTWKERENNKRRERRRRAIAAKMYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPS-PMEIAGXPTNMSACSSIQQ 99 
                    689************************************************************************9.******************* PP

         DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvs 147
                    s++ssa++s v+sy+asp+sssfpsp+++d +++     llp+l++ ++++
  MDP0000410792 100 SPQSSAFPSXVPSYHASPSSSSFPSPTRFDGNPS----YLLPFLRNIASIP 146
                    ******************************9966....5888888877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-626129IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKMYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKGCKPS PMEIAGXPTN MSACSSIQQS PQSSAFPSXV PSYHASPSSS  120
SFPSPTRFDG NPSYLLPFLR NIASIPTNLP PLRISNSAPV TPPLSSPTSR GSKRKPDWDS  180
LTNGCINSLR HPLFAASAPS SPTRRHHLTP ATIPECDESD ASTVDSGRWV SFQTGAPLVA  240
PPSPTFNLMK PVAEQNVLQD AVEAHVGMGW ASTAERGRGS DFEFESGTVK AWEGERIHEV  300
GADDLELTLG NGKNH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-29986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-29986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-29986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-29986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.121300.0bud| cell culture| fruit| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008338783.20.0BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-113BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A498HZZ30.0A0A498HZZ3_MALDO; Uncharacterized protein
STRINGXP_009349751.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-95BES1 family protein