PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000321461
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 422aa    MW: 46080.3 Da    PI: 6.7957
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000321461genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.53.6e-34358412155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  MDP0000321461 358 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 412
                    68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.077355415IPR017930Myb domain
SuperFamilySSF466897.17E-18356412IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.1E-32357414IPR009057Homeodomain-like
TIGRFAMsTIGR015578.1E-25358412IPR006447Myb domain, plants
PfamPF002493.8E-10360411IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MAIGEKKDIK SKXKNNLRDX NLKQPLVIKK XKIIAHEDSD QGSXKSGSIG MVLVSTFVAV  60
CGSFEFGSCV GYSAPTQSAI REDLNLSLAQ MEARPAMSIR TSAAKQLTHM GVSAAMSSSL  120
PVLPTSLEET YPKLPDSQQV SRERELMTRP VGHAGRLTSN SGVVGHIFSS SSGFSTDLHY  180
SALSPHEKQS KNSPFISQSS AALPLPHSPH SGFLQSTESC PYPKENSGSW CTDSLPGFLH  240
FPVNSHVENS QIESSSCSGI MSADEFVKRH DWQDWADQLI TDDDALTSNW NELLDDNSVT  300
DLEQKMKYQA PQPSSTFSAE QSQVHQQQPA SSGEIIPAPS REIISVPATS SANSAPAKAR  360
MRWTPELHEA FVEAVNQLGG SERATPKGVL KLMKVEGLTI YHVKSHLQKY RTARYRPESS  420
EX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-33357416160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.8931e-142bud| fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954802.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_028954803.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_028954804.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_028954805.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_028954806.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_028954807.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
TrEMBLA0A498IV600.0A0A498IV60_MALDO; Uncharacterized protein
STRINGXP_008358479.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15123498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.13e-74phosphate starvation response 1