PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000314191
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 281aa    MW: 31799.7 Da    PI: 7.4577
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000314191genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-182878155
            AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +++ GVr++  +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  MDP0000314191 28 CKFVGVRQRX-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 78
                   799*****99.7*********33....36**********************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.25E-312888No hitNo description
PfamPF008471.9E-122878IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-282987IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-192987IPR016177DNA-binding domain
SMARTSM003809.0E-362992IPR001471AP2/ERF domain
PROSITE profilePS5103220.0072986IPR001471AP2/ERF domain
PRINTSPR003672.3E-73041IPR001471AP2/ERF domain
PRINTSPR003672.3E-75268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MEHQAPKQQK GXLANKQRKF KERTKSKCKF VGVRQRXSGK WVAEIKDTTK KIRMWLGTFE  60
TAEEAARAYD EAAYLLRGSN TRTNFATHVP SNSPLSLKIR NLLNKKKSLK QCPVSSTPNS  120
LNSTPTATST RTSNKYTSFS DGSAFSIATF SETFLPNCKS QKNLQVFDDA YRPDISNCID  180
DLQPGLFHNH FGLQWPLLTG FDQLPITHEG MDLAKGNALT VQXSVAVEPE VTEFECLEVE  240
RQISASFYTM NGXNEYFDNE YNAGDALWDL PNEFQLFSEF D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-143091668ATERF1
3gcc_A2e-143091668ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008366134.20.0ethylene-responsive transcription factor ERN1-like
TrEMBLA0A498IKG40.0A0A498IKG4_MALDO; Uncharacterized protein
STRINGXP_008366134.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-47related to AP2 11