PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000303333
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 177aa    MW: 19376.2 Da    PI: 4.492
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000303333genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-181666155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   s y+GVr +k +g+Wv+eIr+p   g ++ ++lg+f t+e+Aa+a++ a++ ++g
  MDP0000303333 16 STYRGVRKRK-WGKWVSEIREP---GTKTXIWLGSFETPEMAAAAYDVAALHFRG 66
                   56*****999.**********8...325***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.80E-221676No hitNo description
SuperFamilySSF541712.68E-221675IPR016177DNA-binding domain
PROSITE profilePS5103222.9721774IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-311775IPR001471AP2/ERF domain
SMARTSM003801.7E-371780IPR001471AP2/ERF domain
PfamPF008473.3E-111766IPR001471AP2/ERF domain
PRINTSPR003671.0E-121829IPR001471AP2/ERF domain
PRINTSPR003671.0E-125676IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MGDPANSSNA YGPASSTYRG VRKRKWGKWV SEIREPGTKT XIWLGSFETP EMAAAAYDVA  60
ALHFRGRDAR LNFPELVSNL PRPASSTPDD IRTAAQEAAL MLRGSGAGAV EGHDQVEGSS  120
SNVGPVTVRL SPSQIQAINE SPLDSPKMWM QMAEPTMFSD DFENQWEDMP NDSLWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-151879668ATERF1
3gcc_A5e-151879668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008378774.21e-127ethylene-responsive transcription factor ERF021
SwissprotQ9C9I22e-64ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A498JF791e-126A0A498JF79_MALDO; Uncharacterized protein
STRINGXP_008378774.11e-127(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.16e-67ERF family protein