PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000290477

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 426aa MW: 47946.3 Da PI: 10.8388

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000290477	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	58.2	1.8e-18	54	92	16	54
G2-like 16 eaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 ve+LGG ++AtPk +l++m+vkgL ++hvkSHLQ+Y MDP0000290477 54 YSVERLGGDQRATPKMVLQTMNVKGLNISHVKSHLQMYT 92 579***********************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	1.4E-11	55	92	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	3.0E-15	55	94	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MVDFDALSRP LRSRLKHNSR EASSRPRLPP SFSGPRQSLS DDRQLVEIIP VVIYSVERLG 60 GDQRATPKMV LQTMNVKGLN ISHVKSHLQM YTSMKHEQGI QAALAAKKNE SEMRQWKREG 120 EYRQVLDRAP SSEWWRRRGM APIELMSKSH AATSDQSSHQ GSNTYVAPSP TLSQSLSFKD 180 SVETVRNVFG RWRKSVGEPT KKAEDLAGNT WQLLKTSPSF ADAAMGRIAL GTKLLAEGGY 240 EKIFRSTFKT TLEEQLQNSF ACYLSTSVQS WEFYMFLLQS LRIAVIIPFR TKLRAKSSSW 300 SSVSLHNLQL HHHHSPENNA VMAAKWSRDH DDKGIQTSND AKLLPSHYKV PASPYVSTLG 360 RWIDKTPSTI IPKKSGHFRK RKQKEKKKET PSSKNRQKQS STSSGTGTTN GSSTNSNHAL 420 THAVNM

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MVDFDALSRP LRSRLKHNSR EASSRPRLPP SFSGPRQSLS DDRQLVEIIP VVIYSVERLG  60
GDQRATPKMV LQTMNVKGLN ISHVKSHLQM YTSMKHEQGI QAALAAKKNE SEMRQWKREG  120
EYRQVLDRAP SSEWWRRRGM APIELMSKSH AATSDQSSHQ GSNTYVAPSP TLSQSLSFKD  180
SVETVRNVFG RWRKSVGEPT KKAEDLAGNT WQLLKTSPSF ADAAMGRIAL GTKLLAEGGY  240
EKIFRSTFKT TLEEQLQNSF ACYLSTSVQS WEFYMFLLQS LRIAVIIPFR TKLRAKSSSW  300
SSVSLHNLQL HHHHSPENNA VMAAKWSRDH DDKGIQTSND AKLLPSHYKV PASPYVSTLG  360
RWIDKTPSTI IPKKSGHFRK RKQKEKKKET PSSKNRQKQS STSSGTGTTN GSSTNSNHAL  420
THAVNM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	380	388	RKQKEKKKE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-14	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000290477